Source: BEFREE

Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs9653226
rs9653226
CUI: C0027819
Disease: Neuroblastoma
Neuroblastoma
0.010 GeneticVariation BEFREE The results showed that only rs57961569 G>A was associated with neuroblastoma risk (GA vs GG: adjusted odds ratio =0.76, 95% confidence interval =0.60-0.98, <i>P</i>=0.033), while the other 3 SNPs were not (rs9653226 T>C, rs13034994 A>G, and rs60226897 G>A). 29997440

2018

dbSNP: rs938050921
rs938050921
CUI: C0027819
Disease: Neuroblastoma
Neuroblastoma
0.010 GeneticVariation BEFREE In order to investigate the basis of the tissue specificity of mutant SOD1 we compared the effect of the continuous expression of wild-type or mutant (G93A) human SOD1 on mitochondrial morphology in the NSC-34 motoneuronal-like, the N18TG2 neuroblastoma and the non-neuronal Madin-Darby Canine Kidney (MDCK) cell lines. 16903849

2006

dbSNP: rs9295536
rs9295536
CUI: C0027819
Disease: Neuroblastoma
Neuroblastoma
0.830 GeneticVariation BEFREE We confirmed that CASC15 rs6939340 A>G, rs4712653 T>C, rs9295536 C>A, LIN28B rs221634 A>T, and LMO1 rs110419 A>G were associated with significantly altered neuroblastoma susceptibility. 29024823

2017

dbSNP: rs9295536
rs9295536
CUI: C0027819
Disease: Neuroblastoma
Neuroblastoma
0.830 GeneticVariation BEFREE In this case-control study, we analyzed the association between three single nucleotide polymorphisms (SNPs) in the <i>CASC15</i> gene (rs6939340 A>G, rs4712653 T>C, and rs9295536 C>A) and neuroblastoma susceptibility in the Guangdong and Henan populations of China. 29207648

2017

dbSNP: rs9295536
rs9295536
CUI: C0027819
Disease: Neuroblastoma
Neuroblastoma
0.830 GeneticVariation BEFREE The protective association between variant allele and neuroblastoma susceptibility was also observed for the rs4712653 and rs9295536 polymorphisms. 26307394

2016

dbSNP: rs915927
rs915927
CUI: C0027819
Disease: Neuroblastoma
Neuroblastoma
0.010 GeneticVariation BEFREE Herein, we conducted a case-control study with 393 neuroblastoma patients and 812 controls to explore the association of <i>XRCC1</i> gene polymorphisms (rs1799782 G>A, rs25487 C>T, rs25489 C>T and rs915927 T>C) with neuroblastoma risk. 30362960

2018

dbSNP: rs879255652
rs879255652
CUI: C0027819
Disease: Neuroblastoma
Neuroblastoma
0.010 GeneticVariation BEFREE The E1483K mutation causing mild epilepsy showed no significant biophysical changes, whereas the R1872W mutation causing severe epilepsy induced clear gain-of-function biophysical changes in neuroblastoma cells. 30615093

2019

dbSNP: rs878854066
rs878854066
CUI: C0027819
Disease: Neuroblastoma
Neuroblastoma
0.010 GeneticVariation BEFREE Overall, we confirmed that miR-34b/c rs4938723 and TP53 Arg72Pro conferred decreased neuroblastoma risk and two polymorphisms exerted stronger protective effects against neuroblastoma than either one alone. 31325764

2019

dbSNP: rs874945
rs874945
CUI: C0027819
Disease: Neuroblastoma
Neuroblastoma
0.010 GeneticVariation BEFREE The authors found that the rs12826786 C>T (P =.013), rs874945 C>T (P =.020), and rs1899663 C>A (P =.029) polymorphisms were significantly associated with increased neuroblastoma risk. 29603181

2018

dbSNP: rs873601
rs873601
CUI: C0027819
Disease: Neuroblastoma
Neuroblastoma
0.010 GeneticVariation BEFREE In this study with 256 neuroblastoma cases and 531 cancer-free controls, we investigated the effects of five potentially functional polymorphisms (rs2094258 C>T, rs751402 C>T, rs2296147 T>C, rs1047768 T>C and rs873601G>A) on neuroblastoma risk. 27019310

2016

dbSNP: rs869312966
rs869312966
CUI: C0027819
Disease: Neuroblastoma
Neuroblastoma
0.010 GeneticVariation BEFREE In contrast, the R1620L mutation associated with intellectual disability and autism-but not epilepsy-reduced Na+ current density in neuroblastoma cells and expectedly decreased neuronal firing. 30615093

2019

dbSNP: rs867182279
rs867182279
CUI: C0027819
Disease: Neuroblastoma
Neuroblastoma
0.010 GeneticVariation BEFREE The most frequent ALK mutations in neuroblastoma cause amino acid substitutions (F1174L and R1275Q) in the intracellular tyrosine kinase domain of the intact ALK receptor. 22072639

2011

dbSNP: rs863225285
rs863225285
ALK
CUI: C0027819
Disease: Neuroblastoma
Neuroblastoma
0.020 GeneticVariation BEFREE Our results show that the Y1278S mutant observed in patients with neuroblastoma harbors gain-of-function activity. 29084134

2017

dbSNP: rs863225285
rs863225285
ALK
CUI: C0027819
Disease: Neuroblastoma
Neuroblastoma
0.020 GeneticVariation BEFREE Herein, we have illustrated the dynamic conformational property of wild-type ALK as well as the kinase activation equilibrium variation induced by two neuroblastoma mutations (R1275Q and Y1278S) and ATP binding by performing enhanced sampling accelerated Molecular Dynamics (aMD) simulations. 29638111

2018

dbSNP: rs863225281
rs863225281
ALK
CUI: C0027819
Disease: Neuroblastoma
Neuroblastoma
0.100 GeneticVariation BEFREE However, lethal neuroblastoma</span> frequently developed in mice co-expressing ALK F1174L and MYCN, even in a genetic background where MYCN alone does not cause overt tumors. 31218818

2019

dbSNP: rs863225281
rs863225281
ALK
CUI: C0027819
Disease: Neuroblastoma
Neuroblastoma
0.100 GeneticVariation BEFREE We have shown that the combination of crizotinib and an inhibitor of downstream signaling induces a favorable response in transgenic mice bearing ALK(F1174L)/MYCN-positive neuroblastoma. 25228590

2014

dbSNP: rs863225281
rs863225281
ALK
CUI: C0027819
Disease: Neuroblastoma
Neuroblastoma
0.100 GeneticVariation BEFREE Intrinsic susceptibility-MRI could thus potentially provide a non-invasive and clinically-exploitable method to help identifying children with MYCN-driven neuroblastoma harboring the ALK(F1174L) mutation at the time of diagnosis. 24667968

2014

dbSNP: rs863225281
rs863225281
ALK
CUI: C0027819
Disease: Neuroblastoma
Neuroblastoma
0.100 GeneticVariation BEFREE Expression of MYCN or ALK(F1174L), one of the oncogenic ALK variants identified in primary neuroblastomas, enabled these cells to grow independently of c-MycER(T) activity in vitro and caused formation of neuroblastoma-like tumors in vivo in contrast to parental JoMa1 cells and JoMa1 cells-expressing TrkA or GFP. 22484425

2013

dbSNP: rs863225281
rs863225281
ALK
CUI: C0027819
Disease: Neuroblastoma
Neuroblastoma
0.100 GeneticVariation BEFREE Here, we report similar basal patterns of ALK phosphorylation between the neuroblastoma IMR-32 cell line, which expresses only the wild-type receptor (ALK(WT)), and the SH-SY5Y cell line, which exhibits a heterozygous ALK F1174L mutation and expresses both ALK(WT) and ALK(F1174L) receptors. 22479414

2012

dbSNP: rs863225281
rs863225281
ALK
CUI: C0027819
Disease: Neuroblastoma
Neuroblastoma
0.100 GeneticVariation BEFREE The most frequent ALK mutations in neuroblastoma cause amino acid substitutions (F1174L and R1275Q) in the intracellular tyrosine kinase domain of the intact ALK receptor. 22072639

2011

dbSNP: rs863225281
rs863225281
ALK
CUI: C0027819
Disease: Neuroblastoma
Neuroblastoma
0.100 GeneticVariation BEFREE Activating mutations within the full-length ALK kinase domain, most commonly R1275Q and F1174L, which play a major role in neuroblastoma, were recently identified. 20632993

2010

dbSNP: rs863225281
rs863225281
ALK
CUI: C0027819
Disease: Neuroblastoma
Neuroblastoma
0.100 GeneticVariation BEFREE Targeted ALK(F1174L) and MYCN coexpression revealed a strong synergism in inducing neuroblastoma with minimal chromosomal aberrations, suggesting that fewer secondary hits are required for tumor induction if both oncoproteins are targeted. 22764207

2012

dbSNP: rs863225281
rs863225281
ALK
CUI: C0027819
Disease: Neuroblastoma
Neuroblastoma
0.100 GeneticVariation BEFREE The two most frequent mutations, ALK-F1174L and ALK-R1275Q, contribute to NB tumorigenesis in mouse models, and cooperate with MYCN in the oncogenic process. 24947326

2014

dbSNP: rs863225281
rs863225281
ALK
CUI: C0027819
Disease: Neuroblastoma
Neuroblastoma
0.100 GeneticVariation BEFREE Altogether, we report for the first time that the expression of the human ALK-F1174L mutation in NCCs during embryonic development profoundly disturbs early sympathetic progenitor differentiation, in addition to increasing their proliferation, both mechanisms being potential crucial events in NB oncogenesis. 31058082

2019

dbSNP: rs863225281
rs863225281
ALK
CUI: C0027819
Disease: Neuroblastoma
Neuroblastoma
0.100 GeneticVariation BEFREE Furthermore, two human neuroblastoma cell lines harbouring the F1174L</span> mutation were also sensitive to the inhibitor. 18923525

2008